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Unmapped RNA Virus Diversity in Termites and Their Symbionts
https://oist.repo.nii.ac.jp/records/1829
https://oist.repo.nii.ac.jp/records/1829b12599fb-7c24-468a-9ab2-67b0507e72c1
名前 / ファイル | ライセンス | アクション |
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Lay-2020-Unmapped RNA Virus Diversity in Termi (9.7 MB)
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Creative Commons Attribution 4.0 International(https://creativecommons.org/licenses/by/4.0/)
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Item type | 学術雑誌論文 / Journal Article(1) | |||||
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公開日 | 2020-12-04 | |||||
タイトル | ||||||
言語 | en | |||||
タイトル | Unmapped RNA Virus Diversity in Termites and Their Symbionts | |||||
言語 | ||||||
言語 | eng | |||||
キーワード | ||||||
言語 | en | |||||
主題Scheme | Other | |||||
主題 | RNA viruses | |||||
キーワード | ||||||
言語 | en | |||||
主題Scheme | Other | |||||
主題 | evolution | |||||
キーワード | ||||||
言語 | en | |||||
主題Scheme | Other | |||||
主題 | ecology | |||||
キーワード | ||||||
言語 | en | |||||
主題Scheme | Other | |||||
主題 | metatranscriptomics | |||||
キーワード | ||||||
言語 | en | |||||
主題Scheme | Other | |||||
主題 | RNA sequencing | |||||
キーワード | ||||||
言語 | en | |||||
主題Scheme | Other | |||||
主題 | termites | |||||
資源タイプ | ||||||
資源タイプ識別子 | http://purl.org/coar/resource_type/c_6501 | |||||
資源タイプ | journal article | |||||
著者(英) |
Lay, Callum Le
× Lay, Callum Le× Shi, Mang× Buček, Aleš× Bourguignon, Thomas× Lo, Nathan× Holmes, Edward C. |
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書誌情報 |
en : Viruses 巻 12, 号 10, p. 1145, 発行日 2020-10-09 |
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抄録 | ||||||
内容記述タイプ | Other | |||||
内容記述 | Despite their ecological importance, nothing is known about the diversity and abundance of RNA viruses in termites (Termitoidae). We used a metatranscriptomics approach to determine the RNA virome structure of 50 diverse species of termite that differ in both phylogenetic position and colony composition. From these samples, we identified 67 novel RNA viruses, characterized their genomes, quantified their abundance and inferred their evolutionary history. These viruses were found within or similar to those from the Togaviridae, Iflaviridae, Polycipiviridae, Flaviviridae, Leviviridae, Narnaviridae, Mitoviridae, Lispivirdae, Phasmaviridae, Picobirnaviridae and Partitiviridae. However, all viruses identified were novel and divergent, exhibiting only 20% to 45% amino acid identity to previously identified viruses. Our analysis suggested that 17 of the viruses identified were termite-infecting, with the remainder likely associated with the termite microbiome or diet. Unclassified sobemo-like and bunya-like viruses dominated termite viromes, while most of the phylogenetic diversity was provided by the picobirna- and mitovirus-like viruses. Of note was the identification of a novel flavi-like virus most closely related to those found in marine vertebrates and invertebrates. Notably, the sampling procedure had the strongest association with virome composition, with greater RNA virome diversity in libraries prepared from whole termite bodies than those that only sampled heads. | |||||
出版者 | ||||||
出版者 | MDPI | |||||
ISSN | ||||||
収録物識別子タイプ | ISSN | |||||
収録物識別子 | 1999-4915 | |||||
PubMed番号 | ||||||
関連タイプ | isIdenticalTo | |||||
識別子タイプ | PMID | |||||
関連識別子 | info:pmid/33050289 | |||||
DOI | ||||||
関連タイプ | isIdenticalTo | |||||
識別子タイプ | DOI | |||||
関連識別子 | info:doi/10.3390/v12101145 | |||||
権利 | ||||||
権利情報 | © 2020 The Author(s). | |||||
関連サイト | ||||||
識別子タイプ | URI | |||||
関連識別子 | https://www.mdpi.com/1999-4915/12/10/1145 | |||||
著者版フラグ | ||||||
出版タイプ | VoR | |||||
出版タイプResource | http://purl.org/coar/version/c_970fb48d4fbd8a85 |