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Generation and Characterization of a Cell Type-Specific, Inducible Cre-Driver Line to Study Olfactory Processing
https://oist.repo.nii.ac.jp/records/2246
https://oist.repo.nii.ac.jp/records/224621071bf7-a3f5-439e-bf58-e5a344573666
名前 / ファイル | ライセンス | アクション |
---|---|---|
Koldaeva-2021-Generation and characterisation (9.0 MB)
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CC BY 4.0
Creative Commons Attribution 4.0 International (https://creativecommons.org/licenses/by/4.0/) |
Item type | 学術雑誌論文 / Journal Article(1) | |||||
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公開日 | 2021-09-08 | |||||
タイトル | ||||||
言語 | en | |||||
タイトル | Generation and Characterization of a Cell Type-Specific, Inducible Cre-Driver Line to Study Olfactory Processing | |||||
言語 | ||||||
言語 | eng | |||||
キーワード | ||||||
主題Scheme | Other | |||||
主題 | CRISPR | |||||
キーワード | ||||||
主題Scheme | Other | |||||
主題 | olfaction | |||||
キーワード | ||||||
主題Scheme | Other | |||||
主題 | scRNA-seq | |||||
資源タイプ | ||||||
資源タイプ識別子 | http://purl.org/coar/resource_type/c_6501 | |||||
資源タイプ | journal article | |||||
著者(英) |
Koldaeva, Anzhelika
× Koldaeva, Anzhelika× Zhang, Cary× Huang, Yu-Pei× Reinert, Janine Kristin× Mizuno, Seiya× Sugiyama, Fumihiro× Takahashi, Satoru× Soliman, Taha× Matsunami, Hiroaki× Fukunaga, Izumi |
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書誌情報 |
en : The Journal of Neuroscience 巻 41, 号 30, p. 6449-6467, 発行日 2021-07-28 |
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抄録 | ||||||
内容記述タイプ | Other | |||||
内容記述 | In sensory systems of the brain, mechanisms exist to extract distinct features from stimuli to generate a variety of behavioral repertoires. These often correspond to different cell types at various stages in sensory processing. In the mammalian olfactory system, complex information processing starts in the olfactory bulb, whose output is conveyed by mitral cells (MCs) and tufted cells (TCs). Despite many differences between them, and despite the crucial position they occupy in the information hierarchy, Cre-driver lines that distinguish them do not yet exist. Here, we sought to identify genes that are differentially expressed between MCs and TCs of the mouse, with an ultimate goal to generate a cell type-specific Cre-driver line, starting from a transcriptome analysis using a large and publicly available single-cell RNA-seq dataset (Zeisel et al., 2018). Many genes were differentially expressed, but only a few showed consistent expressions in MCs and at the specificity required. After further validating these putative markers using ISH, two genes (i.e., Pkib and Lbdh2) remained as promising candidates. Using CRISPR/Cas9-mediated gene editing, we generated Cre-driver lines and analyzed the resulting recombination patterns. This indicated that our new inducible Cre-driver line, Lbhd2-CreERT2, can be used to genetically label MCs in a tamoxifen dose-dependent manner, both in male and female mice, as assessed by soma locations, projection patterns, and sensory-evoked responses in vivo. Hence, this is a promising tool for investigating cell type-specific contributions to olfactory processing and demonstrates the power of publicly accessible data in accelerating science. | |||||
出版者 | ||||||
出版者 | Society for Neuroscience | |||||
ISSN | ||||||
収録物識別子タイプ | ISSN | |||||
収録物識別子 | 0270-6474 | |||||
ISSN | ||||||
収録物識別子タイプ | ISSN | |||||
収録物識別子 | 1529-2401 | |||||
PubMed番号 | ||||||
関連タイプ | isIdenticalTo | |||||
識別子タイプ | PMID | |||||
関連識別子 | info:pmid/34099512 | |||||
DOI | ||||||
関連タイプ | isIdenticalTo | |||||
識別子タイプ | DOI | |||||
関連識別子 | info:doi/10.1523/JNEUROSCI.3076-20.2021 | |||||
権利 | ||||||
権利情報 | © 2021 Koldaeva et al. | |||||
関連サイト | ||||||
識別子タイプ | URI | |||||
関連識別子 | https://www.jneurosci.org/content/41/30/6449 | |||||
著者版フラグ | ||||||
出版タイプ | VoR | |||||
出版タイプResource | http://purl.org/coar/version/c_970fb48d4fbd8a85 |