WEKO3
アイテム
{"_buckets": {"deposit": "65be68f7-7254-48cb-b015-bd807463c3ec"}, "_deposit": {"created_by": 27, "id": "718", "owners": [27], "pid": {"revision_id": 0, "type": "depid", "value": "718"}, "status": "published"}, "_oai": {"id": "oai:oist.repo.nii.ac.jp:00000718", "sets": ["166", "167", "172"]}, "author_link": ["3662", "3660", "3659", "3661", "3658", "3663"], "item_10001_biblio_info_7": {"attribute_name": "Bibliographic Information", "attribute_value_mlt": [{"bibliographicIssueDates": {"bibliographicIssueDate": "2017-12-11", "bibliographicIssueDateType": "Issued"}, "bibliographicPageStart": "2451", "bibliographicVolumeNumber": "8", "bibliographic_titles": [{}, {"bibliographic_title": "Frontiers in Microbiology", "bibliographic_titleLang": "en"}]}]}, "item_10001_creator_3": {"attribute_name": "Author", "attribute_type": "creator", "attribute_value_mlt": [{"creatorNames": [{"creatorName": "Soliman, Taha"}], "nameIdentifiers": [{"nameIdentifier": "3658", "nameIdentifierScheme": "WEKO"}]}, {"creatorNames": [{"creatorName": "Reimer, James D."}], "nameIdentifiers": [{"nameIdentifier": "3659", "nameIdentifierScheme": "WEKO"}]}, {"creatorNames": [{"creatorName": "Yang, Sung-Yin"}], "nameIdentifiers": [{"nameIdentifier": "3660", "nameIdentifierScheme": "WEKO"}]}, {"creatorNames": [{"creatorName": "Villar-Briones, Alejandro"}], "nameIdentifiers": [{"nameIdentifier": "3661", "nameIdentifierScheme": "WEKO"}]}, {"creatorNames": [{"creatorName": "Roy, Michael C."}], "nameIdentifiers": [{"nameIdentifier": "3662", "nameIdentifierScheme": "WEKO"}]}, {"creatorNames": [{"creatorName": "Jenke-Kodama, Holger"}], "nameIdentifiers": [{"nameIdentifier": "3663", "nameIdentifierScheme": "WEKO"}]}]}, "item_10001_description_5": {"attribute_name": "Abstract", "attribute_value_mlt": [{"subitem_description": "Microbial community diversity and chemodiversity were investigated in marine sediments adjacent to the Okinawan \"Kaichu-Doro\" Causeway, which was constructed 46 years ago to connect a group of four islands (Henza-jima, Miyagi-jima, Ikei-jima, Hamahiga-jima) to the Okinawan main island. This causeway was not built on pilings, but by land reclamation; hence, it now acts as a long, thin peninsula. The construction of this causeway was previously shown to have influenced the surrounding marine ecosystem, causing ecosystem fragmentation and loss of water circulation. In this study, we collected sediment cores (n = 10) from five paired sites in 1 m water depths. Each pair of sites consisted of one site each on the immediate north and south sides of the causeway. Originally the members of each pair were much closer to each other (\u003c150 m) than to other pairs, but now the members of each pair are isolated by the causeway. Each core was 60-80 cm long and was divided into 15-cm layers. We examined the vertical diversity of microbial communities and chemical compounds to determine the correlation between chemodiversity and microbial communities among marine sediment cores and layers. Principal coordinate analyses (PCoA) of detected compounds and of bacterial and archaeal operational taxonomic units (OTUs) revealed that the north and south sides of the causeway are relatively isolated, with each side having unique microbial OTUs. Additionally, some bacterial families (e.g., Acidaminobacteraceae, Rhizobiaceae, and Xanthomonadaceae) were found only on the south side of Kaichu-Doro. Interestingly, we found that the relative abundance of OTUs for some microbial families increased from top to bottom, but this was reversed in some other families. We conclude that the causeway has altered microbial community composition and metabolite profiles in marine sediments.", "subitem_description_type": "Other"}]}, "item_10001_publisher_8": {"attribute_name": "Publisher", "attribute_value_mlt": [{"subitem_publisher": "Frontiers Media S.A."}]}, "item_10001_relation_13": {"attribute_name": "PubMedNo.", "attribute_value_mlt": [{"subitem_relation_type": "isIdenticalTo", "subitem_relation_type_id": {"subitem_relation_type_id_text": "info:pmid/29321767", "subitem_relation_type_select": "PMID"}}]}, "item_10001_relation_14": {"attribute_name": "DOI", "attribute_value_mlt": [{"subitem_relation_type": "isIdenticalTo", "subitem_relation_type_id": {"subitem_relation_type_id_text": "info:doi/10.3389/fmicb.2017.02451", "subitem_relation_type_select": "DOI"}}]}, "item_10001_relation_17": {"attribute_name": "Related site", "attribute_value_mlt": [{"subitem_relation_type_id": {"subitem_relation_type_id_text": "https://www.frontiersin.org/articles/10.3389/fmicb.2017.02451/full", "subitem_relation_type_select": "URI"}}]}, "item_10001_rights_15": {"attribute_name": "Rights", "attribute_value_mlt": [{"subitem_rights": "© 2017 Soliman, Reimer, Yang, Villar-Briones, Roy and Jenke-Kodama. "}]}, "item_10001_source_id_9": {"attribute_name": "ISSN", "attribute_value_mlt": [{"subitem_source_identifier": "1664-302X", "subitem_source_identifier_type": "ISSN"}]}, "item_10001_version_type_20": {"attribute_name": "Author\u0027s flag", "attribute_value_mlt": [{"subitem_version_resource": "http://purl.org/coar/version/c_970fb48d4fbd8a85", "subitem_version_type": "VoR"}]}, "item_files": {"attribute_name": "ファイル情報", "attribute_type": "file", "attribute_value_mlt": [{"accessrole": "open_date", "date": [{"dateType": "Available", "dateValue": "2018-10-09"}], "displaytype": "detail", "download_preview_message": "", "file_order": 0, "filename": "fmicb-08-02451.pdf", "filesize": [{"value": "7.6 MB"}], "format": "application/pdf", "future_date_message": "", "is_thumbnail": false, "licensefree": "Creative Commons\nAttribution 4.0 International\n(https://creativecommons.org/licenses/by/4.0/)", "licensetype": "license_free", "mimetype": "application/pdf", "size": 7600000.0, "url": {"label": "fmicb-08-02451", "url": "https://oist.repo.nii.ac.jp/record/718/files/fmicb-08-02451.pdf"}, "version_id": "1a238846-9050-4852-9227-59ae2b5bd0d5"}]}, "item_language": {"attribute_name": "言語", "attribute_value_mlt": [{"subitem_language": "eng"}]}, "item_resource_type": {"attribute_name": "資源タイプ", "attribute_value_mlt": [{"resourcetype": "journal article", "resourceuri": "http://purl.org/coar/resource_type/c_6501"}]}, "item_title": "Diversity of Microbial Communities and Quantitative Chemodiversity in Layers of Marine Sediment Cores from a Causeway (Kaichu-Doro) in Okinawa Island, Japan", "item_titles": {"attribute_name": "タイトル", "attribute_value_mlt": [{"subitem_title": "Diversity of Microbial Communities and Quantitative Chemodiversity in Layers of Marine Sediment Cores from a Causeway (Kaichu-Doro) in Okinawa Island, Japan", "subitem_title_language": "en"}]}, "item_type_id": "10001", "owner": "27", "path": ["166", "167", "172"], "permalink_uri": "https://oist.repo.nii.ac.jp/records/718", "pubdate": {"attribute_name": "公開日", "attribute_value": "2018-10-09"}, "publish_date": "2018-10-09", "publish_status": "0", "recid": "718", "relation": {}, "relation_version_is_last": true, "title": ["Diversity of Microbial Communities and Quantitative Chemodiversity in Layers of Marine Sediment Cores from a Causeway (Kaichu-Doro) in Okinawa Island, Japan"], "weko_shared_id": 27}
Diversity of Microbial Communities and Quantitative Chemodiversity in Layers of Marine Sediment Cores from a Causeway (Kaichu-Doro) in Okinawa Island, Japan
https://oist.repo.nii.ac.jp/records/718
https://oist.repo.nii.ac.jp/records/718e5ff6a14-be91-404b-95e1-2c7c402438d4
名前 / ファイル | ライセンス | アクション |
---|---|---|
fmicb-08-02451 (7.6 MB)
|
Creative Commons
Attribution 4.0 International (https://creativecommons.org/licenses/by/4.0/) |
Item type | 学術雑誌論文 / Journal Article(1) | |||||
---|---|---|---|---|---|---|
公開日 | 2018-10-09 | |||||
タイトル | ||||||
言語 | en | |||||
タイトル | Diversity of Microbial Communities and Quantitative Chemodiversity in Layers of Marine Sediment Cores from a Causeway (Kaichu-Doro) in Okinawa Island, Japan | |||||
言語 | ||||||
言語 | eng | |||||
資源タイプ | ||||||
資源タイプ識別子 | http://purl.org/coar/resource_type/c_6501 | |||||
資源タイプ | journal article | |||||
著者(英) |
Soliman, Taha
× Soliman, Taha× Reimer, James D.× Yang, Sung-Yin× Villar-Briones, Alejandro× Roy, Michael C.× Jenke-Kodama, Holger |
|||||
書誌情報 |
en : Frontiers in Microbiology 巻 8, p. 2451, 発行日 2017-12-11 |
|||||
抄録 | ||||||
内容記述タイプ | Other | |||||
内容記述 | Microbial community diversity and chemodiversity were investigated in marine sediments adjacent to the Okinawan "Kaichu-Doro" Causeway, which was constructed 46 years ago to connect a group of four islands (Henza-jima, Miyagi-jima, Ikei-jima, Hamahiga-jima) to the Okinawan main island. This causeway was not built on pilings, but by land reclamation; hence, it now acts as a long, thin peninsula. The construction of this causeway was previously shown to have influenced the surrounding marine ecosystem, causing ecosystem fragmentation and loss of water circulation. In this study, we collected sediment cores (n = 10) from five paired sites in 1 m water depths. Each pair of sites consisted of one site each on the immediate north and south sides of the causeway. Originally the members of each pair were much closer to each other (<150 m) than to other pairs, but now the members of each pair are isolated by the causeway. Each core was 60-80 cm long and was divided into 15-cm layers. We examined the vertical diversity of microbial communities and chemical compounds to determine the correlation between chemodiversity and microbial communities among marine sediment cores and layers. Principal coordinate analyses (PCoA) of detected compounds and of bacterial and archaeal operational taxonomic units (OTUs) revealed that the north and south sides of the causeway are relatively isolated, with each side having unique microbial OTUs. Additionally, some bacterial families (e.g., Acidaminobacteraceae, Rhizobiaceae, and Xanthomonadaceae) were found only on the south side of Kaichu-Doro. Interestingly, we found that the relative abundance of OTUs for some microbial families increased from top to bottom, but this was reversed in some other families. We conclude that the causeway has altered microbial community composition and metabolite profiles in marine sediments. | |||||
出版者 | ||||||
出版者 | Frontiers Media S.A. | |||||
ISSN | ||||||
収録物識別子タイプ | ISSN | |||||
収録物識別子 | 1664-302X | |||||
PubMed番号 | ||||||
関連タイプ | isIdenticalTo | |||||
識別子タイプ | PMID | |||||
関連識別子 | info:pmid/29321767 | |||||
DOI | ||||||
関連タイプ | isIdenticalTo | |||||
識別子タイプ | DOI | |||||
関連識別子 | info:doi/10.3389/fmicb.2017.02451 | |||||
権利 | ||||||
権利情報 | © 2017 Soliman, Reimer, Yang, Villar-Briones, Roy and Jenke-Kodama. | |||||
関連サイト | ||||||
識別子タイプ | URI | |||||
関連識別子 | https://www.frontiersin.org/articles/10.3389/fmicb.2017.02451/full | |||||
著者版フラグ | ||||||
出版タイプ | VoR | |||||
出版タイプResource | http://purl.org/coar/version/c_970fb48d4fbd8a85 |