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Spectral analysis for gene communities in cancer cells
https://oist.repo.nii.ac.jp/records/1702
https://oist.repo.nii.ac.jp/records/17026de90b64-357d-42aa-b1fc-eb35d54756a0
名前 / ファイル | ライセンス | アクション |
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main1 (2.6 MB)
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Supplementary_file (268.3 kB)
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Item type | 学術雑誌論文 / Journal Article(1) | |||||
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公開日 | 2020-09-24 | |||||
タイトル | ||||||
言語 | en | |||||
タイトル | Spectral analysis for gene communities in cancer cells | |||||
言語 | ||||||
言語 | eng | |||||
資源タイプ | ||||||
資源タイプ識別子 | http://purl.org/coar/resource_type/c_6501 | |||||
資源タイプ | journal article | |||||
著者(英) |
Kikkawa, Ayumi
× Kikkawa, Ayumi |
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書誌情報 |
en : Journal of Complex Networks 巻 8, 号 1, 発行日 2020-02-20 |
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抄録 | ||||||
内容記述タイプ | Other | |||||
内容記述 | We investigate gene interaction networks in various cancer cells by spectral analysis of the adjacency matrices. We observe the localization of the networks on hub genes, which have an extraordinary number of links. The eigenvector centralities take finite values only on special nodes when the hub degree exceeds the critical value dc≃40. The degree correlation function shows the disassortative behaviour in the large degrees, and the nodes whose degrees are d≳40 have a tendency to link to small degree nodes. The communities of the gene networks centred at the hub genes are extracted based on the amount of node degree discrepancies between linked nodes. We verify the Wigner–Dyson distribution of the nearest neighbour eigenvalues spacing distribution P(s) in the small degree discrepancy communities (the assortative communities), and the Poisson P(s) in the communities of large degree discrepancies (the disassortative communities) including the hubs. | |||||
出版者 | ||||||
出版者 | Oxford University Press | |||||
ISSN | ||||||
収録物識別子タイプ | ISSN | |||||
収録物識別子 | 2051-1329 | |||||
ISSN | ||||||
収録物識別子タイプ | ISSN | |||||
収録物識別子 | 2051-1310 | |||||
DOI | ||||||
関連タイプ | isVersionOf | |||||
識別子タイプ | DOI | |||||
関連識別子 | info:doi/10.1093/comnet/cnaa005 | |||||
権利 | ||||||
権利情報 | This is a pre-copyedited, author-produced version of an article accepted for publication in Journal of Complex Networks following peer review. The version of record, Ayumi Kikkawa, Spectral analysis for gene communities in cancer cells, Journal of Complex Networks, Volume 8, Issue 1, February 2020, cnaa005, is available online at: https://doi.org/10.1093/comnet/cnaa005. | |||||
関連サイト | ||||||
識別子タイプ | DOI | |||||
関連識別子 | https://doi.org/10.1093/comnet/cnaa005 | |||||
著者版フラグ | ||||||
出版タイプ | AM | |||||
出版タイプResource | http://purl.org/coar/version/c_ab4af688f83e57aa |