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ENMTools 1.0: an R package for comparative ecological biogeography
https://oist.repo.nii.ac.jp/records/2404
https://oist.repo.nii.ac.jp/records/2404aa2b3211-fbb5-43af-8773-1da74db85f0c
名前 / ファイル | ライセンス | アクション |
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ecog.05485 (3.7 MB)
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Item type | 学術雑誌論文 / Journal Article(1) | |||||
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公開日 | 2021-12-02 | |||||
タイトル | ||||||
言語 | en | |||||
タイトル | ENMTools 1.0: an R package for comparative ecological biogeography | |||||
言語 | ||||||
言語 | eng | |||||
キーワード | ||||||
主題Scheme | Other | |||||
主題 | biogeography | |||||
キーワード | ||||||
主題Scheme | Other | |||||
主題 | ecology | |||||
キーワード | ||||||
主題Scheme | Other | |||||
主題 | ENM | |||||
キーワード | ||||||
主題Scheme | Other | |||||
主題 | ENMTools | |||||
キーワード | ||||||
主題Scheme | Other | |||||
主題 | SDM | |||||
資源タイプ | ||||||
資源タイプ識別子 | http://purl.org/coar/resource_type/c_6501 | |||||
資源タイプ | journal article | |||||
著者(英) |
Warren, Dan L.
× Warren, Dan L.× Matzke, Nicholas J.× Cardillo, Marcel× Baumgartner, John B.× Beaumont, Linda J.× Turelli, Michael× Glor, Richard E.× Huron, Nicholas A.× Simões, Marianna× Iglesias, Teresa L.× Piquet, Julien C.× Dinnage, Russell |
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書誌情報 |
en : Ecography 巻 44, 号 4, p. 504-511, 発行日 2021-01-19 |
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抄録 | ||||||
内容記述タイプ | Other | |||||
内容記述 | The ENMTools software package was introduced in 2008 as a platform for making measurements on environmental niche models (ENMs, frequently referred to as species distribution models or SDMs), and for using those measurements in the context of newly developed Monte Carlo tests to evaluate hypotheses regarding niche evolution. Additional functionality was later added for model selection and simulation from ENMs, and the software package has been quite widely used. ENMTools was initially implemented as a Perl script, which was also compiled into an executable file for various platforms. However, the package had a number of significant limitations; it was only designed to fit models using Maxent, it relied on a specific Perl distribution to function, and its internal structure made it difficult to maintain and expand. Subsequently, the R programming language became the platform of choice for most ENM studies, making ENMTools less usable for many practitioners. Here we introduce a new R version of ENMTools that implements much of the functionality of its predecessor as well as numerous additions that simplify the construction, comparison and evaluation of niche models. These additions include new metrics for model fit, methods of measuring ENM overlap, and methods for testing evolutionary hypotheses. The new version of ENMTools is also designed to work within the expanding universe of R tools for ecological biogeography, and as such includes greatly simplified interfaces for analyses from several other R packages. | |||||
出版者 | ||||||
出版者 | John Wiley & Sons Ltd on behalf of Nordic Society Oikos. | |||||
ISSN | ||||||
収録物識別子タイプ | ISSN | |||||
収録物識別子 | 0906-7590 | |||||
ISSN | ||||||
収録物識別子タイプ | ISSN | |||||
収録物識別子 | 1600-0587 | |||||
DOI | ||||||
関連タイプ | isIdenticalTo | |||||
識別子タイプ | DOI | |||||
関連識別子 | info:doi/10.1111/ecog.05485 | |||||
権利 | ||||||
権利情報 | © 2021 The Author(s). | |||||
関連サイト | ||||||
識別子タイプ | URI | |||||
関連識別子 | https://onlinelibrary.wiley.com/doi/10.1111/ecog.05485 | |||||
著者版フラグ | ||||||
出版タイプ | VoR | |||||
出版タイプResource | http://purl.org/coar/version/c_970fb48d4fbd8a85 |