{"created":"2023-06-26T11:00:48.512593+00:00","id":1399,"links":{},"metadata":{"_buckets":{"deposit":"14fa9451-5b89-4b9f-94f9-4f851b23bd7e"},"_deposit":{"created_by":28,"id":"1399","owners":[28],"pid":{"revision_id":0,"type":"depid","value":"1399"},"status":"published"},"_oai":{"id":"oai:oist.repo.nii.ac.jp:00001399","sets":["6:77"]},"author_link":["8486","8487","8485"],"item_10001_biblio_info_7":{"attribute_name":"Bibliographic Information","attribute_value_mlt":[{"bibliographicIssueDates":{"bibliographicIssueDate":"2019-12-13","bibliographicIssueDateType":"Issued"},"bibliographicIssueNumber":"6","bibliographicPageStart":"062502","bibliographicVolumeNumber":"100","bibliographic_titles":[{},{"bibliographic_title":"Physical Review E","bibliographic_titleLang":"en"}]}]},"item_10001_creator_3":{"attribute_name":"Author","attribute_type":"creator","attribute_value_mlt":[{"creatorNames":[{"creatorName":"Chiuchiù, Davide"}],"nameIdentifiers":[{}]},{"creatorNames":[{"creatorName":"Ferrare, James"}],"nameIdentifiers":[{}]},{"creatorNames":[{"creatorName":"Pigolotti, Simone"}],"nameIdentifiers":[{}]}]},"item_10001_description_5":{"attribute_name":"Abstract","attribute_value_mlt":[{"subitem_description":"In biochemistry, heteropolymers encoding biological information are assembled out of equilibrium by sequentially incorporating available monomers found in the environment. Current models of polymerization treat monomer incorporation as a sequence of discrete chemical reactions between intermediate metastable states. In this paper, we use ideas from reaction rate theory and describe nonequilibrium assembly of a heteropolymer via a continuous reaction coordinate. Our approach allows for estimating the copy error and incorporation speed from the Gibbs free energy landscape of the process. We apply our theory to several examples from a simple reaction characterized by a free energy barrier to more complex cases incorporating error correction mechanisms, such as kinetic proofreading.","subitem_description_type":"Other"}]},"item_10001_publisher_8":{"attribute_name":"Publisher","attribute_value_mlt":[{"subitem_publisher":"American Physical Society"}]},"item_10001_relation_13":{"attribute_name":"PubMedNo.","attribute_value_mlt":[{"subitem_relation_type":"isIdenticalTo","subitem_relation_type_id":{"subitem_relation_type_id_text":"info:pmid/31962425","subitem_relation_type_select":"PMID"}}]},"item_10001_relation_14":{"attribute_name":"DOI","attribute_value_mlt":[{"subitem_relation_type":"isIdenticalTo","subitem_relation_type_id":{"subitem_relation_type_id_text":"info:doi/10.1103/PhysRevE.100.062502","subitem_relation_type_select":"DOI"}}]},"item_10001_relation_17":{"attribute_name":"Related site","attribute_value_mlt":[{"subitem_relation_type_id":{"subitem_relation_type_id_text":"https://journals.aps.org/pre/abstract/10.1103/PhysRevE.100.062502","subitem_relation_type_select":"URI"}}]},"item_10001_rights_15":{"attribute_name":"Rights","attribute_value_mlt":[{"subitem_rights":"©2019 American Physical Society"}]},"item_10001_source_id_9":{"attribute_name":"ISSN","attribute_value_mlt":[{"subitem_source_identifier":"2470-0045","subitem_source_identifier_type":"ISSN"},{"subitem_source_identifier":"2470-0053","subitem_source_identifier_type":"ISSN"}]},"item_10001_version_type_20":{"attribute_name":"Author's flag","attribute_value_mlt":[{"subitem_version_resource":"http://purl.org/coar/version/c_970fb48d4fbd8a85","subitem_version_type":"VoR"}]},"item_files":{"attribute_name":"ファイル情報","attribute_type":"file","attribute_value_mlt":[{"accessrole":"open_date","date":[{"dateType":"Available","dateValue":"2020-04-23"}],"displaytype":"detail","filename":"Chiuchiu-2019-Assembly of heteropolymers via a.pdf","filesize":[{"value":"746.5 kB"}],"format":"application/pdf","licensetype":"license_note","mimetype":"application/pdf","url":{"label":"Chiuchiu-2019-Assembly of heteropolymers via a","url":"https://oist.repo.nii.ac.jp/record/1399/files/Chiuchiu-2019-Assembly of heteropolymers via a.pdf"},"version_id":"e62af972-8393-4ed3-a6f7-d3b9c731e49c"}]},"item_language":{"attribute_name":"言語","attribute_value_mlt":[{"subitem_language":"eng"}]},"item_resource_type":{"attribute_name":"資源タイプ","attribute_value_mlt":[{"resourcetype":"journal article","resourceuri":"http://purl.org/coar/resource_type/c_6501"}]},"item_title":"Assembly of heteropolymers via a network of reaction coordinates","item_titles":{"attribute_name":"タイトル","attribute_value_mlt":[{"subitem_title":"Assembly of heteropolymers via a network of reaction coordinates","subitem_title_language":"en"}]},"item_type_id":"10001","owner":"28","path":["77"],"pubdate":{"attribute_name":"公開日","attribute_value":"2020-04-23"},"publish_date":"2020-04-23","publish_status":"0","recid":"1399","relation_version_is_last":true,"title":["Assembly of heteropolymers via a network of reaction coordinates"],"weko_creator_id":"28","weko_shared_id":28},"updated":"2023-06-26T11:50:29.782889+00:00"}