{"created":"2023-06-26T11:00:19.183066+00:00","id":765,"links":{},"metadata":{"_buckets":{"deposit":"3367a8c0-f2a9-458c-a51b-9bc422f46b2c"},"_deposit":{"created_by":27,"id":"765","owners":[27],"pid":{"revision_id":0,"type":"depid","value":"765"},"status":"published"},"_oai":{"id":"oai:oist.repo.nii.ac.jp:00000765","sets":["6:31"]},"author_link":["3941","3943","3940","3942"],"item_10001_biblio_info_7":{"attribute_name":"Bibliographic Information","attribute_value_mlt":[{"bibliographicIssueDates":{"bibliographicIssueDate":"2017-12-01","bibliographicIssueDateType":"Issued"},"bibliographicIssueNumber":"8","bibliographicPageEnd":"1405","bibliographicPageStart":"1404","bibliographicVolumeNumber":"34","bibliographic_titles":[{},{"bibliographic_title":"Bioinformatics","bibliographic_titleLang":"en"}]}]},"item_10001_creator_3":{"attribute_name":"Author","attribute_type":"creator","attribute_value_mlt":[{"creatorNames":[{"creatorName":"Orakov, Askarbek N"}],"nameIdentifiers":[{}]},{"creatorNames":[{"creatorName":"Sakenova, Nazgul K"}],"nameIdentifiers":[{}]},{"creatorNames":[{"creatorName":"Sorokin, Anatoly"}],"nameIdentifiers":[{}]},{"creatorNames":[{"creatorName":"Goryanin, Igor I"}],"nameIdentifiers":[{}]}]},"item_10001_description_5":{"attribute_name":"Abstract","attribute_value_mlt":[{"subitem_description":"Motivation: Functional and taxonomic analyses are critical steps in understanding interspecific interactions within microbial communities. Currently, such analyses are run separately, which complicates interpretation of results. Here we present the ASAR interactive tool for simultaneous analysis of metagenomic data in three dimensions: taxonomy, function, metagenome. \nResults: An interactive data analysis tool for selection, aggregation and visualization of metagenomic data is presented. Functional analysis with a SEED hierarchy and pathway diagram based on KEGG orthology based upon MG-RAST annotation results is available. \nAvailability and implementation: Source code of the ASAR is accessible at GitHub (https://github.com/Askarbek-orakov/ASAR). Contact: askarbek.orakov@nu.edu.kz or goryanin@gmail.com.","subitem_description_type":"Other"}]},"item_10001_publisher_8":{"attribute_name":"Publisher","attribute_value_mlt":[{"subitem_publisher":"Oxford University Press"}]},"item_10001_relation_13":{"attribute_name":"PubMedNo.","attribute_value_mlt":[{"subitem_relation_type":"isIdenticalTo","subitem_relation_type_id":{"subitem_relation_type_id_text":"info:pmid/29211828","subitem_relation_type_select":"PMID"}}]},"item_10001_relation_14":{"attribute_name":"DOI","attribute_value_mlt":[{"subitem_relation_type":"isIdenticalTo","subitem_relation_type_id":{"subitem_relation_type_id_text":"info:doi/10.1093/bioinformatics/btx775","subitem_relation_type_select":"DOI"}}]},"item_10001_relation_17":{"attribute_name":"Related site","attribute_value_mlt":[{"subitem_relation_type_id":{"subitem_relation_type_id_text":"https://academic.oup.com/bioinformatics/article/34/8/1404/4683460","subitem_relation_type_select":"URI"}}]},"item_10001_rights_15":{"attribute_name":"Rights","attribute_value_mlt":[{"subitem_rights":"© 2018 The Author(s)."}]},"item_10001_source_id_9":{"attribute_name":"ISSN","attribute_value_mlt":[{"subitem_source_identifier":"1460-2059","subitem_source_identifier_type":"ISSN"}]},"item_10001_version_type_20":{"attribute_name":"Author's flag","attribute_value_mlt":[{"subitem_version_resource":"http://purl.org/coar/version/c_970fb48d4fbd8a85","subitem_version_type":"VoR"}]},"item_files":{"attribute_name":"ファイル情報","attribute_type":"file","attribute_value_mlt":[{"accessrole":"open_date","date":[{"dateType":"Available","dateValue":"2018-12-06"}],"displaytype":"detail","filename":"Orakov-2018-ASAR_ visual analysis of metagenom.pdf","filesize":[{"value":"889.4 kB"}],"format":"application/pdf","license_note":"Creative Commons \nAttribution 4.0 International\n(https://creativecommons.org/licenses/by/4.0/)","licensetype":"license_note","mimetype":"application/pdf","url":{"label":"Orakov-2018-ASAR_ visual analysis of metagenom","url":"https://oist.repo.nii.ac.jp/record/765/files/Orakov-2018-ASAR_ visual analysis of metagenom.pdf"},"version_id":"776cdbec-b6b8-4435-9232-09f044d8e36c"}]},"item_language":{"attribute_name":"言語","attribute_value_mlt":[{"subitem_language":"eng"}]},"item_resource_type":{"attribute_name":"資源タイプ","attribute_value_mlt":[{"resourcetype":"journal article","resourceuri":"http://purl.org/coar/resource_type/c_6501"}]},"item_title":"ASAR: visual analysis of metagenomes in R","item_titles":{"attribute_name":"タイトル","attribute_value_mlt":[{"subitem_title":"ASAR: visual analysis of metagenomes in R","subitem_title_language":"en"}]},"item_type_id":"10001","owner":"27","path":["31"],"pubdate":{"attribute_name":"公開日","attribute_value":"2018-12-06"},"publish_date":"2018-12-06","publish_status":"0","recid":"765","relation_version_is_last":true,"title":["ASAR: visual analysis of metagenomes in R"],"weko_creator_id":"27","weko_shared_id":27},"updated":"2023-06-26T12:03:25.564935+00:00"}