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Transcriptomic profiling of the mussel Mytilus trossulus with a special emphasis on integrin-like genes during development
https://oist.repo.nii.ac.jp/records/1645
https://oist.repo.nii.ac.jp/records/16452a4e0452-0b98-4578-8528-ee8579854ac1
| 名前 / ファイル | ライセンス | アクション |
|---|---|---|
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| Item type | 学術雑誌論文 / Journal Article(1) | |||||
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| 公開日 | 2020-07-28 | |||||
| タイトル | ||||||
| タイトル | Transcriptomic profiling of the mussel Mytilus trossulus with a special emphasis on integrin-like genes during development | |||||
| 言語 | en | |||||
| 言語 | ||||||
| 言語 | eng | |||||
| 資源タイプ | ||||||
| 資源タイプ識別子 | http://purl.org/coar/resource_type/c_6501 | |||||
| 資源タイプ | journal article | |||||
| 著者（英） |
Maiorova, Mariia A.
× Maiorova, Mariia A.× Satoh, Noriyuki× Khalturin, Konstantin× Odintsova, Nelly A. |
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| 書誌情報 |
en : Invertebrate Reproduction & Development 巻 63, 号 4, p. 231-240, 発行日 2019-06-10 |
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| 抄録 | ||||||
| 内容記述タイプ | Other | |||||
| 内容記述 | This study is based on the Illumina RNA-sequencing data obtained for a de novo assembly of the transcriptome from early developmental stages and some tissues and cells of the adult mussel Mytilus trossulus (Mytilidae, Mollusca) using the Trinity program. A total of 200,079 contigs were obtained, and compared to the NCBI database using BLAST to search for sequence similarity. The number of annotated contigs under the GO term 3 categories was estimated to reach 19.96%. The BUSCO analysis determined a level of 99.2% completeness for the assembled transcriptome. The main findings include evidence that the mussel ? integrin-like protein sequences are very similar to the ? integrin-like proteins so far sequenced for all classes of Mollusca, while the highest similarity is observed between mussel and oyster (Crasostrea gigas) ? integrin-like proteins. Our transcriptome dataset contributes to the genetic databases of non-model animals such as bivalves and represents the first characterization of expressed sequences during early development of the mollusc M. trossulus from the Sea of Japan including the identification of candidate genes involved in cell adhesion. | |||||
| 出版者 | ||||||
| 出版者 | Taylor and Francis | |||||
| ISSN | ||||||
| 収録物識別子タイプ | ISSN | |||||
| 収録物識別子 | 0792-4259 | |||||
| ISSN | ||||||
| 収録物識別子タイプ | ISSN | |||||
| 収録物識別子 | 2157-0272 | |||||
| DOI | ||||||
| 関連タイプ | isVersionOf | |||||
| 識別子タイプ | DOI | |||||
| 関連識別子 | info:doi/10.1080/07924259.2019.1626774 | |||||
| 権利 | ||||||
| 権利情報 | This is an Accepted Manuscript of an article published by Taylor & Francis in Invertebrate Reproduction & Development on 10/06/2019, available online: http://www.tandfonline.com/10.1080/07924259.2019.1626774. | |||||
| 関連サイト | ||||||
| 識別子タイプ | URI | |||||
| 関連識別子 | http://www.tandfonline.com/10.1080/07924259.2019.1626774 | |||||
| 著者版フラグ | ||||||
| 出版タイプ | AM | |||||
| 出版タイプResource | http://purl.org/coar/version/c_ab4af688f83e57aa | |||||
